Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Traf1P39428 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Gm20486-201ENSMUST00000101544 128 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm25415-201ENSMUST00000104220 132 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm13193-201ENSMUST00000117275 225 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm12040-201ENSMUST00000118357 537 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm14805-201ENSMUST00000120172 340 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm14331-201ENSMUST00000120396 409 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm24179-201ENSMUST00000158925 127 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm7152-201ENSMUST00000163570 605 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Mir6973b-201ENSMUST00000184185 80 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm7266-201ENSMUST00000187999 405 ntBASIC7.13□□□□□ -1.27
Traf1P39428 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC7.13□□□□□ -1.27
Traf1P39428 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.13□□□□□ -1.27
Traf1P39428 Gm18290-201ENSMUST00000202900 844 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm44251-201ENSMUST00000204963 442 ntBASIC7.13□□□□□ -1.27
Traf1P39428 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC7.13□□□□□ -1.27
Traf1P39428 AC156037.1-201ENSMUST00000221133 127 ntBASIC7.13□□□□□ -1.27
Traf1P39428 AC125543.3-201ENSMUST00000221991 126 ntBASIC7.13□□□□□ -1.27
Traf1P39428 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Traf1P39428 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Traf1P39428 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Traf1P39428 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Traf1P39428 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
Traf1P39428 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Traf1P39428 Gm25345-201ENSMUST00000104505 133 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm12099-201ENSMUST00000118660 750 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm14115-201ENSMUST00000119242 482 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm14237-201ENSMUST00000122080 430 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.12□□□□□ -1.27
Traf1P39428 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm19560-201ENSMUST00000177510 514 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm25065-201ENSMUST00000177914 132 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm25891-201ENSMUST00000180050 132 ntBASIC7.12□□□□□ -1.27
Traf1P39428 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.12□□□□□ -1.27
Traf1P39428 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.12□□□□□ -1.27
Traf1P39428 Gm35013-201ENSMUST00000197218 832 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm31211-201ENSMUST00000199170 253 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm44837-201ENSMUST00000206863 717 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm45850-201ENSMUST00000212536 338 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Gm45724-201ENSMUST00000213031 420 ntBASIC7.12□□□□□ -1.27
Traf1P39428 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.12□□□□□ -1.27
Traf1P39428 CT030645.3-201ENSMUST00000225483 1022 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Traf1P39428 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
Traf1P39428 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Gm37249-201ENSMUST00000195185 2869 ntBASIC7.12□□□□□ -1.27
Traf1P39428 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC7.12□□□□□ -1.27
Traf1P39428 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Traf1P39428 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Traf1P39428 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC7.12□□□□□ -1.27
Traf1P39428 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Traf1P39428 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Traf1P39428 Gm37186-201ENSMUST00000195629 2861 ntBASIC7.11□□□□□ -1.27
Traf1P39428 Gm12057-201ENSMUST00000117244 1427 ntBASIC7.11□□□□□ -1.27
Traf1P39428 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Traf1P39428 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Traf1P39428 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Traf1P39428 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Traf1P39428 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Traf1P39428 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.11□□□□□ -1.27
Traf1P39428 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Traf1P39428 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Traf1P39428 Gm14938-201ENSMUST00000119482 943 ntBASIC7.11□□□□□ -1.27
Traf1P39428 Gm8430-201ENSMUST00000119780 471 ntBASIC7.11□□□□□ -1.27
Traf1P39428 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.11□□□□□ -1.27
Traf1P39428 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Traf1P39428 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms