Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lire1P11260 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lire1P11260 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Gm37789-201ENSMUST00000192862 2889 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lire1P11260 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm12849-201ENSMUST00000120013 739 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm14369-201ENSMUST00000121355 285 ntBASIC6.09□□□□□ -1.43
Lire1P11260 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.09□□□□□ -1.43
Lire1P11260 Gm26486-201ENSMUST00000158021 110 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm25435-201ENSMUST00000158277 267 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 Gm29357-201ENSMUST00000186877 698 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm38068-201ENSMUST00000192546 540 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm36965-201ENSMUST00000193797 394 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.09□□□□□ -1.43
Lire1P11260 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 Gm18040-201ENSMUST00000217922 827 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm7413-201ENSMUST00000219498 462 ntBASIC6.09□□□□□ -1.43
Lire1P11260 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC6.09□□□□□ -1.43
Lire1P11260 AC163621.2-201ENSMUST00000222229 682 ntBASIC6.09□□□□□ -1.43
Lire1P11260 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.09□□□□□ -1.43
Lire1P11260 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.09□□□□□ -1.43
Lire1P11260 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.09□□□□□ -1.43
Lire1P11260 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Lire1P11260 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lire1P11260 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lire1P11260 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lire1P11260 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.09□□□□□ -1.44
Lire1P11260 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Lire1P11260 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Lire1P11260 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.09□□□□□ -1.44
Lire1P11260 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Lire1P11260 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.08□□□□□ -1.44
Lire1P11260 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 Gm24473-201ENSMUST00000104483 131 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 Gm13176-201ENSMUST00000117910 477 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Gm11920-201ENSMUST00000118491 563 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.08□□□□□ -1.44
Lire1P11260 Gm14725-201ENSMUST00000120324 828 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 Gm12540-201ENSMUST00000121938 319 ntBASIC6.08□□□□□ -1.44
Lire1P11260 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 Gm5871-201ENSMUST00000176461 718 ntBASIC6.08□□□□□ -1.44
Lire1P11260 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 Gm29141-201ENSMUST00000190357 882 ntBASIC6.08□□□□□ -1.44
Lire1P11260 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Gm10416-201ENSMUST00000197379 645 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.08□□□□□ -1.44
Lire1P11260 Gm43459-201ENSMUST00000202093 331 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Gm44162-201ENSMUST00000203543 544 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.08□□□□□ -1.44
Lire1P11260 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.08□□□□□ -1.44
Lire1P11260 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC6.08□□□□□ -1.44
Lire1P11260 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.08□□□□□ -1.44
Lire1P11260 Gm5928-201ENSMUST00000221839 466 ntBASIC6.08□□□□□ -1.44
Lire1P11260 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.08□□□□□ -1.44
Lire1P11260 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Lire1P11260 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Lire1P11260 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.08□□□□□ -1.44
Lire1P11260 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.08□□□□□ -1.44
Lire1P11260 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Lire1P11260 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lire1P11260 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Lire1P11260 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms