Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm26106-201ENSMUST00000157254 228 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm24940-201ENSMUST00000158326 108 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm29376-201ENSMUST00000189357 835 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm44417-201ENSMUST00000203298 3359 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm6744-201ENSMUST00000119303 543 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm8358-201ENSMUST00000167222 555 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm42522-201ENSMUST00000196071 255 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Gm17165-201ENSMUST00000096155 493 ntBASIC5.06□□□□□ -1.6
Col6a4A2AX52 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a4A2AX52 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm8032-201ENSMUST00000171009 574 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm6543-201ENSMUST00000197353 808 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm29745-201ENSMUST00000198005 687 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm4548-201ENSMUST00000208487 509 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.05□□□□□ -1.6
Col6a4A2AX52 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
Col6a4A2AX52 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms