Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm43233-201ENSMUST00000200491 616 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 BC049739-201ENSMUST00000202626 660 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm45628-201ENSMUST00000210849 274 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm19212-201ENSMUST00000216642 862 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm22684-201ENSMUST00000082849 132 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.75□□□□□ -1.49
Trim3Q9R1R2 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm12262-201ENSMUST00000119915 305 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm15618-201ENSMUST00000121610 452 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm23903-201ENSMUST00000157566 131 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm3242-201ENSMUST00000171273 485 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Mir7685-201ENSMUST00000183555 62 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm8869-201ENSMUST00000195222 947 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm7626-201ENSMUST00000195801 353 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm17824-201ENSMUST00000197690 805 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm44463-201ENSMUST00000198895 137 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.74□□□□□ -1.49
Trim3Q9R1R2 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Trim3Q9R1R2 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Snora35-201ENSMUST00000104579 128 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm14173-201ENSMUST00000117690 278 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm12115-201ENSMUST00000119969 447 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm20530-201ENSMUST00000174261 254 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm22701-201ENSMUST00000175371 291 ntBASIC5.73□□□□□ -1.49
Trim3Q9R1R2 Gm27037-201ENSMUST00000182270 960 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms