Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 AC132465.1-201ENSMUST00000219938 1307 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Use1Q9CQ56 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.68□□□□□ -1.5
Use1Q9CQ56 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm25877-201ENSMUST00000104326 129 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm8250-201ENSMUST00000117398 774 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm8501-201ENSMUST00000117684 432 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm13690-201ENSMUST00000118989 285 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm18953-201ENSMUST00000175694 300 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm43906-201ENSMUST00000203194 906 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm9267-201ENSMUST00000222831 404 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm5229-201ENSMUST00000039375 354 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.67□□□□□ -1.5
Use1Q9CQ56 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Mir683-2-201ENSMUST00000102099 109 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm23768-201ENSMUST00000104440 131 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm13811-201ENSMUST00000117800 256 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm13739-201ENSMUST00000118020 530 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm14331-201ENSMUST00000120396 409 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm11370-201ENSMUST00000120583 260 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm2986-201ENSMUST00000121603 382 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm15696-201ENSMUST00000121730 445 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm16260-201ENSMUST00000155141 304 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm16269-201ENSMUST00000160532 409 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm4202-201ENSMUST00000169025 733 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm5947-201ENSMUST00000179156 714 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Mir683-1-201ENSMUST00000179371 109 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm5645-201ENSMUST00000179597 714 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm18700-201ENSMUST00000185791 553 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm29736-201ENSMUST00000198189 385 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Use1Q9CQ56 Gm8863-201ENSMUST00000216630 926 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.66□□□□□ -1.5
Use1Q9CQ56 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms