Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Vps53Q8CCB4 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Vps53Q8CCB4 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.25□□□□□ -1.25
Vps53Q8CCB4 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Vps53Q8CCB4 Gm37342-201ENSMUST00000194588 4965 ntBASIC7.25□□□□□ -1.25
Vps53Q8CCB4 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm42968-201ENSMUST00000198578 1372 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm25962-201ENSMUST00000157173 168 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm26037-201ENSMUST00000158150 311 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm27854-201ENSMUST00000175578 244 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm38291-201ENSMUST00000193671 259 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm29778-201ENSMUST00000201667 466 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm44984-201ENSMUST00000207802 394 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm2996-201ENSMUST00000211398 537 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm18618-201ENSMUST00000222211 473 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm15500-201ENSMUST00000071523 894 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm1966-201ENSMUST00000184540 7293 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
Vps53Q8CCB4 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm13469-201ENSMUST00000118231 350 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm12040-201ENSMUST00000118357 537 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm12565-201ENSMUST00000119004 649 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm9428-201ENSMUST00000127214 769 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm24735-201ENSMUST00000158859 118 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Mir7220-201ENSMUST00000183978 60 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm6693-201ENSMUST00000189583 813 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm43354-201ENSMUST00000196862 346 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm33178-201ENSMUST00000212090 257 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Vps53Q8CCB4 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.23□□□□□ -1.25
Vps53Q8CCB4 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms