Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm19560-201ENSMUST00000177510 514 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Mir7211-201ENSMUST00000184071 63 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm37758-201ENSMUST00000194275 629 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm35013-201ENSMUST00000197218 832 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm43561-201ENSMUST00000199866 448 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm43105-201ENSMUST00000202987 459 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm44412-201ENSMUST00000203018 294 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.29□□□□□ -1.4
Sh3rf2Q8BZT2 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm25317-201ENSMUST00000116824 129 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm13428-201ENSMUST00000117540 365 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm11533-201ENSMUST00000120287 477 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Mir7220-201ENSMUST00000183978 60 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm17934-201ENSMUST00000192818 422 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm5374-202ENSMUST00000222910 314 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm36262-201ENSMUST00000223274 499 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf2Q8BZT2 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.27□□□□□ -1.41
Sh3rf2Q8BZT2 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf2Q8BZT2 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf2Q8BZT2 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.27□□□□□ -1.41
Sh3rf2Q8BZT2 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf2Q8BZT2 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sh3rf2Q8BZT2 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf2Q8BZT2 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.27□□□□□ -1.41
Sh3rf2Q8BZT2 Gm20486-201ENSMUST00000101544 128 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms