Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm37100-201ENSMUST00000193344 1353 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm44750-201ENSMUST00000206185 2223 ntBASIC8.48□□□□□ -1.05
Usp40Q8BWR4 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 AC165080.3-201ENSMUST00000217162 3116 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm42607-201ENSMUST00000200221 3393 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm45177-201ENSMUST00000209104 2307 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm44102-201ENSMUST00000204031 1666 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm25415-201ENSMUST00000104220 132 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm16149-201ENSMUST00000117631 309 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm12105-201ENSMUST00000120846 779 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm23408-201ENSMUST00000158523 265 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm24741-201ENSMUST00000158857 106 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Mir7674-201ENSMUST00000184964 63 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm33571-201ENSMUST00000193271 657 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm43774-201ENSMUST00000196327 878 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm29745-201ENSMUST00000198005 687 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm42640-201ENSMUST00000199792 1195 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm45750-201ENSMUST00000211966 354 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 AC151902.1-201ENSMUST00000227800 375 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm37730-201ENSMUST00000192432 2211 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Usp40Q8BWR4 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
Usp40Q8BWR4 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Usp40Q8BWR4 AC141476.1-201ENSMUST00000224988 3387 ntBASIC8.46□□□□□ -1.05
Usp40Q8BWR4 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Usp40Q8BWR4 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Usp40Q8BWR4 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.46□□□□□ -1.05
Usp40Q8BWR4 Gm37238-201ENSMUST00000195552 2390 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Mir678-201ENSMUST00000102114 84 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm25507-201ENSMUST00000116981 144 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Mir1907-201ENSMUST00000122509 90 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm23149-201ENSMUST00000158837 230 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm22690-201ENSMUST00000175054 110 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm26238-201ENSMUST00000175538 117 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm26595-201ENSMUST00000181585 484 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm27006-201ENSMUST00000182218 943 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm27025-201ENSMUST00000182392 942 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm8419-201ENSMUST00000189886 412 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm37375-201ENSMUST00000193859 387 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Gm37385-201ENSMUST00000195223 387 ntBASIC8.46□□□□□ -1.06
Usp40Q8BWR4 Ass-ps1-201ENSMUST00000197717 761 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms