Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm17366-201ENSMUST00000167629 187 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm15257-201ENSMUST00000177680 883 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm15252-201ENSMUST00000177750 883 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm15256-201ENSMUST00000177793 883 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm15260-201ENSMUST00000179402 883 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm7832-201ENSMUST00000202613 880 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm19182-201ENSMUST00000207139 577 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm19116-201ENSMUST00000218592 642 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm24434-201ENSMUST00000104081 132 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm7146-201ENSMUST00000116079 739 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm15786-201ENSMUST00000121079 450 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm24733-201ENSMUST00000158863 253 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm20530-201ENSMUST00000174261 254 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Mir7046-201ENSMUST00000183435 66 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm18407-201ENSMUST00000192126 790 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm37358-201ENSMUST00000195492 479 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm36378-201ENSMUST00000201709 388 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm44312-201ENSMUST00000203536 469 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm33312-201ENSMUST00000222443 332 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm8412-201ENSMUST00000077493 440 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Upf3bQ3ULL6 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm22374-201ENSMUST00000104583 132 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm7927-201ENSMUST00000118818 880 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm14842-201ENSMUST00000119577 269 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm15781-201ENSMUST00000120216 323 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm23896-201ENSMUST00000158109 130 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm10177-201ENSMUST00000160052 444 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm28527-201ENSMUST00000185210 297 ntBASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Upf3bQ3ULL6 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms