Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm26357-201ENSMUST00000158218 115 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm3841-201ENSMUST00000191399 451 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm37073-201ENSMUST00000192469 1222 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm7496-201ENSMUST00000192573 1034 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm17934-201ENSMUST00000192818 422 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 AC152169.2-201ENSMUST00000224558 613 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm42568-201ENSMUST00000195639 1841 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col17a1Q07563 Gm37551-201ENSMUST00000195556 2861 ntBASIC9.4□□□□□ -0.9
Col17a1Q07563 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Col17a1Q07563 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Col17a1Q07563 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col17a1Q07563 Gm8276-201ENSMUST00000192231 1812 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 Gm42541-201ENSMUST00000199871 2249 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Col17a1Q07563 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Col17a1Q07563 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Col17a1Q07563 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Col17a1Q07563 Gm37629-201ENSMUST00000193635 1050 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 Gm37209-201ENSMUST00000194109 1276 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 Gm29747-201ENSMUST00000194764 585 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 Gm20056-201ENSMUST00000194813 519 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Col17a1Q07563 Gm5735-201ENSMUST00000207053 167 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC9.4□□□□□ -0.91
Col17a1Q07563 AC167222.2-201ENSMUST00000220014 295 ntBASIC9.4□□□□□ -0.91
Col17a1Q07563 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col17a1Q07563 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Col17a1Q07563 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col17a1Q07563 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Col17a1Q07563 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Col17a1Q07563 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Col17a1Q07563 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Col17a1Q07563 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Col17a1Q07563 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Gm6620-201ENSMUST00000120113 715 ntBASIC9.39□□□□□ -0.91
Col17a1Q07563 Gm11910-201ENSMUST00000121624 432 ntBASIC9.39□□□□□ -0.91
Col17a1Q07563 Gm22870-201ENSMUST00000157501 112 ntBASIC9.39□□□□□ -0.91
Col17a1Q07563 Gm15970-201ENSMUST00000160623 834 ntBASIC9.39□□□□□ -0.91
Col17a1Q07563 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Gm37932-201ENSMUST00000192258 1167 ntBASIC9.39□□□□□ -0.91
Col17a1Q07563 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Col17a1Q07563 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC9.39□□□□□ -0.91
Col17a1Q07563 AC133517.2-201ENSMUST00000226820 690 ntBASIC9.39□□□□□ -0.91
Col17a1Q07563 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col17a1Q07563 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Col17a1Q07563 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm14762-201ENSMUST00000105109 1771 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC9.38□□□□□ -0.91
Col17a1Q07563 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm14579-201ENSMUST00000117068 283 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm25026-201ENSMUST00000175017 188 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm20673-201ENSMUST00000177167 430 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Col17a1Q07563 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm44494-201ENSMUST00000196760 129 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm42474-201ENSMUST00000201073 505 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col17a1Q07563 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC9.38□□□□□ -0.91
Col17a1Q07563 AC152979.3-201ENSMUST00000217720 479 ntBASIC9.38□□□□□ -0.91
Col17a1Q07563 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms