Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.29□□□□□ -1.56
Nkx3-1P97436 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm22710-201ENSMUST00000116892 125 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm8424-201ENSMUST00000117716 988 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm12040-201ENSMUST00000118357 537 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm26486-201ENSMUST00000158021 110 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm24735-201ENSMUST00000158859 118 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm8582-201ENSMUST00000164061 789 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm2058-201ENSMUST00000178791 560 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm29650-201ENSMUST00000188485 742 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm17934-201ENSMUST00000192818 422 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm44225-201ENSMUST00000203582 186 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm18618-201ENSMUST00000222211 473 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm2614-201ENSMUST00000223227 403 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm24041-201ENSMUST00000083115 156 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.28□□□□□ -1.56
Nkx3-1P97436 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
Nkx3-1P97436 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm11105-201ENSMUST00000112781 478 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 Mir466j-201ENSMUST00000116876 122 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm5073-201ENSMUST00000118222 820 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm7700-201ENSMUST00000120273 970 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm12654-201ENSMUST00000120387 587 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm12396-201ENSMUST00000121600 306 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm21772-201ENSMUST00000169213 478 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm17126-201ENSMUST00000172276 523 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 Gm24369-201ENSMUST00000175387 96 ntBASIC5.27□□□□□ -1.57
Nkx3-1P97436 Mir3572-201ENSMUST00000175549 86 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms