Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Atxn1P54254 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Atxn1P54254 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.34□□□□□ -1.4
Atxn1P54254 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Atxn1P54254 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Atxn1P54254 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Atxn1P54254 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.33□□□□□ -1.4
Atxn1P54254 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Atxn1P54254 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.33□□□□□ -1.4
Atxn1P54254 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Atxn1P54254 Mir193b-201ENSMUST00000103784 79 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Gm4910-201ENSMUST00000119605 366 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm11852-201ENSMUST00000120806 222 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm15780-201ENSMUST00000121283 935 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC6.33□□□□□ -1.4
Atxn1P54254 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.33□□□□□ -1.4
Atxn1P54254 Gm23673-201ENSMUST00000157474 298 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm25669-201ENSMUST00000157699 112 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm25603-201ENSMUST00000158361 105 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm6472-201ENSMUST00000178147 651 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm2325-201ENSMUST00000186637 581 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm6137-201ENSMUST00000187552 578 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm36638-201ENSMUST00000193295 400 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.33□□□□□ -1.4
Atxn1P54254 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.33□□□□□ -1.4
Atxn1P54254 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm44111-201ENSMUST00000204649 399 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Atxn1P54254 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Atxn1P54254 Gm44869-201ENSMUST00000208836 357 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm19201-201ENSMUST00000210127 778 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 LOC665443-201ENSMUST00000212284 796 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.33□□□□□ -1.4
Atxn1P54254 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Gm18405-201ENSMUST00000220743 511 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Atxn1P54254 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Atxn1P54254 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Atxn1P54254 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Atxn1P54254 Mir337-201ENSMUST00000083592 97 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Atxn1P54254 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.33□□□□□ -1.4
Atxn1P54254 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.33□□□□□ -1.4
Atxn1P54254 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Atxn1P54254 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.33□□□□□ -1.4
Atxn1P54254 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Atxn1P54254 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Atxn1P54254 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Atxn1P54254 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
Atxn1P54254 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Atxn1P54254 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm3931-201ENSMUST00000119038 455 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Gm14613-201ENSMUST00000122239 752 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.32□□□□□ -1.4
Atxn1P54254 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Mir5107-201ENSMUST00000175586 88 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Gm23945-201ENSMUST00000179609 92 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm29159-201ENSMUST00000187969 379 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms