Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Gm23330-201ENSMUST00000082660 164 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
Sox3P53784 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox3P53784 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.88□□□□□ -1.47
Sox3P53784 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox3P53784 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox3P53784 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox3P53784 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Sox3P53784 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm13265-201ENSMUST00000118090 421 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm13604-201ENSMUST00000119332 482 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm14716-201ENSMUST00000120138 718 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm14300-201ENSMUST00000120800 946 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm14601-201ENSMUST00000120892 236 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm8317-201ENSMUST00000121261 471 ntBASIC5.87□□□□□ -1.47
Sox3P53784 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm6808-201ENSMUST00000162341 807 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm9064-201ENSMUST00000163579 566 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.87□□□□□ -1.47
Sox3P53784 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm27409-201ENSMUST00000184727 80 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm8502-201ENSMUST00000185708 901 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm21147-201ENSMUST00000186046 913 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm8506-201ENSMUST00000186661 829 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm18838-201ENSMUST00000204855 886 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.87□□□□□ -1.47
Sox3P53784 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.87□□□□□ -1.47
Sox3P53784 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.87□□□□□ -1.47
Sox3P53784 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.87□□□□□ -1.47
Sox3P53784 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Sox3P53784 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sox3P53784 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.87□□□□□ -1.47
Sox3P53784 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sox3P53784 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Sox3P53784 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Sox3P53784 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Gm26146-201ENSMUST00000104478 185 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm5073-201ENSMUST00000118222 820 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Gm22548-201ENSMUST00000174899 78 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm5947-201ENSMUST00000179156 714 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm5645-201ENSMUST00000179597 714 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Gm18117-201ENSMUST00000187720 742 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm19231-201ENSMUST00000193212 830 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms