Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Shmt1P50431 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Shmt1P50431 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Shmt1P50431 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Shmt1P50431 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Mir678-201ENSMUST00000102114 84 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm14388-201ENSMUST00000118119 477 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm15048-201ENSMUST00000118201 954 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm12040-201ENSMUST00000118357 537 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm13835-201ENSMUST00000118459 685 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm12465-201ENSMUST00000118591 300 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm12244-201ENSMUST00000119500 291 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm12262-201ENSMUST00000119915 305 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm14925-201ENSMUST00000120611 438 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm12327-201ENSMUST00000121729 1168 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.7□□□□□ -1.34
Shmt1P50431 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.7□□□□□ -1.34
Shmt1P50431 Mir6911-201ENSMUST00000184241 69 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm29072-201ENSMUST00000191149 678 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm37511-201ENSMUST00000192901 294 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm44075-201ENSMUST00000204208 216 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Shmt1P50431 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm45473-201ENSMUST00000211452 616 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 AC116589.4-201ENSMUST00000222390 216 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 AC183092.2-201ENSMUST00000225542 1153 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC6.7□□□□□ -1.34
Shmt1P50431 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Shmt1P50431 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Shmt1P50431 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm44897-201ENSMUST00000206187 1341 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.7□□□□□ -1.34
Shmt1P50431 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Shmt1P50431 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Shmt1P50431 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Shmt1P50431 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm12874-201ENSMUST00000117190 913 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm11198-201ENSMUST00000119771 974 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm9005-201ENSMUST00000119908 607 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm11350-201ENSMUST00000121436 870 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm5809-201ENSMUST00000121854 529 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm22276-201ENSMUST00000122469 129 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms