Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.54□□□□□ -1.52
Foxa1P35582 AV026068-216ENSMUST00000223874 328 ntBASIC5.54□□□□□ -1.52
Foxa1P35582 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.54□□□□□ -1.52
Foxa1P35582 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Foxa1P35582 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Foxa1P35582 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 Gm8412-201ENSMUST00000077493 440 ntBASIC5.54□□□□□ -1.52
Foxa1P35582 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Foxa1P35582 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Foxa1P35582 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.54□□□□□ -1.52
Foxa1P35582 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.54□□□□□ -1.52
Foxa1P35582 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Foxa1P35582 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Foxa1P35582 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Foxa1P35582 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.53□□□□□ -1.52
Foxa1P35582 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Foxa1P35582 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Mir449c-201ENSMUST00000102192 109 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Foxa1P35582 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Foxa1P35582 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm13770-201ENSMUST00000117149 305 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Gm23896-201ENSMUST00000158109 130 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Gm9671-201ENSMUST00000171502 547 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm7952-201ENSMUST00000180540 984 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.53□□□□□ -1.52
Foxa1P35582 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm33312-201ENSMUST00000222443 332 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Foxa1P35582 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
Foxa1P35582 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Foxa1P35582 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Foxa1P35582 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.53□□□□□ -1.52
Foxa1P35582 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Foxa1P35582 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Foxa1P35582 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Foxa1P35582 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.52□□□□□ -1.53
Foxa1P35582 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Foxa1P35582 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Foxa1P35582 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Foxa1P35582 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Foxa1P35582 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm23440-201ENSMUST00000104299 130 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm4234-201ENSMUST00000119747 714 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Gm15781-201ENSMUST00000120216 323 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.52□□□□□ -1.53
Foxa1P35582 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm17121-201ENSMUST00000170414 847 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Gm20530-201ENSMUST00000174261 254 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Foxa1P35582 Gm17222-201ENSMUST00000180135 847 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Gm28527-201ENSMUST00000185210 297 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.52□□□□□ -1.53
Foxa1P35582 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.52□□□□□ -1.53
Foxa1P35582 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Foxa1P35582 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms