Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5493S4R2D1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Gm5493S4R2D1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5493S4R2D1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5493S4R2D1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5493S4R2D1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5493S4R2D1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.27■□□□□ 0.04
Gm5493S4R2D1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5493S4R2D1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5493S4R2D1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5493S4R2D1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5493S4R2D1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5493S4R2D1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5493S4R2D1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5493S4R2D1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.22■□□□□ 0.03
Gm5493S4R2D1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5493S4R2D1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.22■□□□□ 0.03
Gm5493S4R2D1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5493S4R2D1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms