Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
H2afb3S4R1G7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.19■□□□□ 0.18
H2afb3S4R1G7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Gm10493-201ENSMUST00000097270 612 ntBASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.19■□□□□ 0.18
H2afb3S4R1G7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb3S4R1G7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb3S4R1G7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
H2afb3S4R1G7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.16■□□□□ 0.18
H2afb3S4R1G7 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.16■□□□□ 0.18
H2afb3S4R1G7 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb3S4R1G7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Fst-202ENSMUST00000223640 2612 ntBASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb3S4R1G7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
H2afb3S4R1G7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
H2afb3S4R1G7 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms