Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Cldn9Q9Z0S7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn9Q9Z0S7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.3■□□□□ 0.36
Cldn9Q9Z0S7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn9Q9Z0S7 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn9Q9Z0S7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn9Q9Z0S7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms