Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcb1Q9Z0H3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smarcb1Q9Z0H3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Gm5417-201ENSMUST00000079706 384 ntBASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcb1Q9Z0H3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcb1Q9Z0H3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Smarcb1Q9Z0H3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.64■□□□□ 0.58
Smarcb1Q9Z0H3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcb1Q9Z0H3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcb1Q9Z0H3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.64■□□□□ 0.57
Smarcb1Q9Z0H3 Gm15565-201ENSMUST00000118890 427 ntBASIC18.64■□□□□ 0.57
Smarcb1Q9Z0H3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcb1Q9Z0H3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.64■□□□□ 0.57
Smarcb1Q9Z0H3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.64■□□□□ 0.57
Smarcb1Q9Z0H3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcb1Q9Z0H3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcb1Q9Z0H3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcb1Q9Z0H3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcb1Q9Z0H3 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.63■□□□□ 0.57
Smarcb1Q9Z0H3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcb1Q9Z0H3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.63■□□□□ 0.57
Smarcb1Q9Z0H3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcb1Q9Z0H3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarcb1Q9Z0H3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcb1Q9Z0H3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcb1Q9Z0H3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcb1Q9Z0H3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcb1Q9Z0H3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcb1Q9Z0H3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcb1Q9Z0H3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcb1Q9Z0H3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcb1Q9Z0H3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcb1Q9Z0H3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcb1Q9Z0H3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcb1Q9Z0H3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.61■□□□□ 0.57
Smarcb1Q9Z0H3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Gm13836-201ENSMUST00000121159 501 ntBASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcb1Q9Z0H3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcb1Q9Z0H3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms