Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn3Q9Z0G9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Cldn3Q9Z0G9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn3Q9Z0G9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cldn3Q9Z0G9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn3Q9Z0G9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Gm29257-201ENSMUST00000186115 639 ntBASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Flg-201ENSMUST00000050758 1488 ntBASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Tgds-204ENSMUST00000228543 1594 ntBASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn3Q9Z0G9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn3Q9Z0G9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms