Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CcsQ9WU84 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CcsQ9WU84 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.96□□□□□ -0.17
CcsQ9WU84 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CcsQ9WU84 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CcsQ9WU84 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CcsQ9WU84 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CcsQ9WU84 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CcsQ9WU84 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CcsQ9WU84 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
CcsQ9WU84 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
CcsQ9WU84 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.96□□□□□ -0.17
CcsQ9WU84 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.96□□□□□ -0.17
CcsQ9WU84 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.96□□□□□ -0.17
CcsQ9WU84 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CcsQ9WU84 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CcsQ9WU84 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CcsQ9WU84 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CcsQ9WU84 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
CcsQ9WU84 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CcsQ9WU84 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CcsQ9WU84 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CcsQ9WU84 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CcsQ9WU84 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.95□□□□□ -0.18
CcsQ9WU84 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.95□□□□□ -0.18
CcsQ9WU84 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.95□□□□□ -0.18
CcsQ9WU84 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.95□□□□□ -0.18
CcsQ9WU84 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CcsQ9WU84 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CcsQ9WU84 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CcsQ9WU84 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CcsQ9WU84 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CcsQ9WU84 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CcsQ9WU84 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CcsQ9WU84 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CcsQ9WU84 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CcsQ9WU84 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CcsQ9WU84 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CcsQ9WU84 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.93□□□□□ -0.18
CcsQ9WU84 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CcsQ9WU84 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CcsQ9WU84 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CcsQ9WU84 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CcsQ9WU84 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Gm26833-201ENSMUST00000180899 440 ntBASIC13.93□□□□□ -0.18
CcsQ9WU84 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CcsQ9WU84 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CcsQ9WU84 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CcsQ9WU84 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.93□□□□□ -0.18
CcsQ9WU84 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CcsQ9WU84 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms