Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Gm12849-201ENSMUST00000120013 739 ntBASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 AC102523.2-201ENSMUST00000227813 983 ntBASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx6Q9R1R0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Gm21814-202ENSMUST00000203277 873 ntBASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx6Q9R1R0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Thoc7-209ENSMUST00000225325 765 ntBASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Lhx6Q9R1R0 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Gm43377-201ENSMUST00000201640 455 ntBASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx6Q9R1R0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Lhx6Q9R1R0 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.77■□□□□ 0.28
Lhx6Q9R1R0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lhx6Q9R1R0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx6Q9R1R0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx6Q9R1R0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx6Q9R1R0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx6Q9R1R0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx6Q9R1R0 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms