Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.35■□□□□ 0.53
Tubd1Q9R1K7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubd1Q9R1K7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubd1Q9R1K7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubd1Q9R1K7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubd1Q9R1K7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubd1Q9R1K7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubd1Q9R1K7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Gm15375-201ENSMUST00000119510 849 ntBASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Gm13158-201ENSMUST00000122007 736 ntBASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.34■□□□□ 0.53
Tubd1Q9R1K7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubd1Q9R1K7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubd1Q9R1K7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tubd1Q9R1K7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubd1Q9R1K7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubd1Q9R1K7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubd1Q9R1K7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tubd1Q9R1K7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubd1Q9R1K7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubd1Q9R1K7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.33■□□□□ 0.52
Tubd1Q9R1K7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubd1Q9R1K7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubd1Q9R1K7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubd1Q9R1K7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubd1Q9R1K7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubd1Q9R1K7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubd1Q9R1K7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Gm10418-201ENSMUST00000100943 576 ntBASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Trmt13-210ENSMUST00000198454 880 ntBASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.31■□□□□ 0.52
Tubd1Q9R1K7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubd1Q9R1K7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Gm11643-201ENSMUST00000119578 864 ntBASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Gm8969-201ENSMUST00000199694 526 ntBASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tubd1Q9R1K7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms