Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn2Q9R0A1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn2Q9R0A1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn2Q9R0A1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Gm29257-201ENSMUST00000186115 639 ntBASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Clcn2Q9R0A1 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn2Q9R0A1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn2Q9R0A1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Clcn2Q9R0A1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn2Q9R0A1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn2Q9R0A1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Clcn2Q9R0A1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn2Q9R0A1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn2Q9R0A1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn2Q9R0A1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn2Q9R0A1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Clcn2Q9R0A1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn2Q9R0A1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn2Q9R0A1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn2Q9R0A1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms