Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Phtf1Q9QZ09 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Mir2861-201ENSMUST00000175539 82 ntBASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Gm10138-203ENSMUST00000206952 366 ntBASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Phtf1Q9QZ09 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Gm22240-201ENSMUST00000175225 82 ntBASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Phtf1Q9QZ09 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Gm18666-201ENSMUST00000190039 958 ntBASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Phtf1Q9QZ09 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Gm15375-201ENSMUST00000119510 849 ntBASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Phtf1Q9QZ09 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Phtf1Q9QZ09 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Phtf1Q9QZ09 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.7■□□□□ 0.74
Phtf1Q9QZ09 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Phtf1Q9QZ09 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms