Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Gm20760-201ENSMUST00000179197 648 ntBASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr2e3Q9QXZ7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr2e3Q9QXZ7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Nr2e3Q9QXZ7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.33■□□□□ 0.85
Nr2e3Q9QXZ7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nr2e3Q9QXZ7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nr2e3Q9QXZ7 Gm13158-201ENSMUST00000122007 736 ntBASIC20.33■□□□□ 0.85
Nr2e3Q9QXZ7 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.33■□□□□ 0.85
Nr2e3Q9QXZ7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Nr2e3Q9QXZ7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nr2e3Q9QXZ7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr2e3Q9QXZ7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr2e3Q9QXZ7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.32■□□□□ 0.84
Nr2e3Q9QXZ7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nr2e3Q9QXZ7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr2e3Q9QXZ7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr2e3Q9QXZ7 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.32■□□□□ 0.84
Nr2e3Q9QXZ7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr2e3Q9QXZ7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.32■□□□□ 0.84
Nr2e3Q9QXZ7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.32■□□□□ 0.84
Nr2e3Q9QXZ7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr2e3Q9QXZ7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Grk6-206ENSMUST00000224995 2971 ntBASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr2e3Q9QXZ7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr2e3Q9QXZ7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Gm5643-201ENSMUST00000117081 966 ntBASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Gm10138-203ENSMUST00000206952 366 ntBASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr2e3Q9QXZ7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr2e3Q9QXZ7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr2e3Q9QXZ7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr2e3Q9QXZ7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr2e3Q9QXZ7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nr2e3Q9QXZ7 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.28■□□□□ 0.84
Nr2e3Q9QXZ7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms