Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.38■□□□□ 0.69
Cpsf3Q9QXK7 Gm10138-203ENSMUST00000206952 366 ntBASIC19.38■□□□□ 0.69
Cpsf3Q9QXK7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf3Q9QXK7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf3Q9QXK7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf3Q9QXK7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf3Q9QXK7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Gm10698-201ENSMUST00000182663 604 ntBASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf3Q9QXK7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.36■□□□□ 0.69
Cpsf3Q9QXK7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf3Q9QXK7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cpsf3Q9QXK7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf3Q9QXK7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf3Q9QXK7 Gm15375-201ENSMUST00000119510 849 ntBASIC19.34■□□□□ 0.69
Cpsf3Q9QXK7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.34■□□□□ 0.69
Cpsf3Q9QXK7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Cpsf3Q9QXK7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf3Q9QXK7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf3Q9QXK7 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf3Q9QXK7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.33■□□□□ 0.68
Cpsf3Q9QXK7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf3Q9QXK7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.33■□□□□ 0.68
Cpsf3Q9QXK7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf3Q9QXK7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf3Q9QXK7 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.33■□□□□ 0.68
Cpsf3Q9QXK7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf3Q9QXK7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.32■□□□□ 0.68
Cpsf3Q9QXK7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf3Q9QXK7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.32■□□□□ 0.68
Cpsf3Q9QXK7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf3Q9QXK7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf3Q9QXK7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf3Q9QXK7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Cpsf3Q9QXK7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf3Q9QXK7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Gm15378-201ENSMUST00000121894 207 ntBASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf3Q9QXK7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf3Q9QXK7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf3Q9QXK7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.3■□□□□ 0.68
Cpsf3Q9QXK7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf3Q9QXK7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.3■□□□□ 0.68
Cpsf3Q9QXK7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf3Q9QXK7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms