Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm6754-201ENSMUST00000117124 913 ntBASIC18.34■□□□□ 0.53
Msh5Q9QUM7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Msh5Q9QUM7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh5Q9QUM7 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.33■□□□□ 0.53
Msh5Q9QUM7 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.33■□□□□ 0.53
Msh5Q9QUM7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh5Q9QUM7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh5Q9QUM7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Msh5Q9QUM7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.32■□□□□ 0.52
Msh5Q9QUM7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh5Q9QUM7 Gm27405-201ENSMUST00000184201 112 ntBASIC18.32■□□□□ 0.52
Msh5Q9QUM7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.32■□□□□ 0.52
Msh5Q9QUM7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh5Q9QUM7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh5Q9QUM7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh5Q9QUM7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh5Q9QUM7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.31■□□□□ 0.52
Msh5Q9QUM7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh5Q9QUM7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Gm45251-201ENSMUST00000209486 1465 ntBASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh5Q9QUM7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Gm44044-201ENSMUST00000205178 1089 ntBASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh5Q9QUM7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh5Q9QUM7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms