Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.33■□□□□ 0.05
Rbfox1Q9JJ43 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rbfox1Q9JJ43 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rbfox1Q9JJ43 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.32■□□□□ 0.04
Rbfox1Q9JJ43 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rbfox1Q9JJ43 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rbfox1Q9JJ43 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Gm42778-201ENSMUST00000199644 553 ntBASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rbfox1Q9JJ43 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.28■□□□□ 0.04
Rbfox1Q9JJ43 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms