Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1fQ9JIS7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1fQ9JIS7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1fQ9JIS7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1fQ9JIS7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1fQ9JIS7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.57■□□□□ 0.88
Cacna1fQ9JIS7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1fQ9JIS7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1fQ9JIS7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Gm2274-201ENSMUST00000184539 609 ntBASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Gm9731-201ENSMUST00000209480 747 ntBASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cacna1fQ9JIS7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1fQ9JIS7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1fQ9JIS7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1fQ9JIS7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1fQ9JIS7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1fQ9JIS7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1fQ9JIS7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1fQ9JIS7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cacna1fQ9JIS7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1fQ9JIS7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1fQ9JIS7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cacna1fQ9JIS7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1fQ9JIS7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1fQ9JIS7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1fQ9JIS7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.52■□□□□ 0.88
Cacna1fQ9JIS7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Cacna1fQ9JIS7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Cacna1fQ9JIS7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
Cacna1fQ9JIS7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cacna1fQ9JIS7 Gm29791-202ENSMUST00000207888 369 ntBASIC20.52■□□□□ 0.87
Cacna1fQ9JIS7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1fQ9JIS7 Mir1668-201ENSMUST00000184114 107 ntBASIC20.51■□□□□ 0.87
Cacna1fQ9JIS7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cacna1fQ9JIS7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1fQ9JIS7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1fQ9JIS7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Gm9013-201ENSMUST00000132939 882 ntBASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cacna1fQ9JIS7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cacna1fQ9JIS7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1fQ9JIS7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cacna1fQ9JIS7 Gm7791-201ENSMUST00000219066 539 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms