Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Gm6211-202ENSMUST00000167849 925 ntBASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a3bpQ9EQG9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.6■□□□□ 0.89
Col4a3bpQ9EQG9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a3bpQ9EQG9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a3bpQ9EQG9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Col4a3bpQ9EQG9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a3bpQ9EQG9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a3bpQ9EQG9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a3bpQ9EQG9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a3bpQ9EQG9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Gm4968-201ENSMUST00000071458 858 ntBASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a3bpQ9EQG9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Gm12441-201ENSMUST00000121806 588 ntBASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Gm5408-201ENSMUST00000197998 747 ntBASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col4a3bpQ9EQG9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Gm27011-201ENSMUST00000182352 972 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms