Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Gm6659-201ENSMUST00000174752 547 ntBASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp8Q9DB85 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rrp8Q9DB85 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rrp8Q9DB85 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Gm18959-201ENSMUST00000208954 655 ntBASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp8Q9DB85 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rrp8Q9DB85 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp8Q9DB85 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Gm27463-201ENSMUST00000183569 57 ntBASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp8Q9DB85 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Gm12085-201ENSMUST00000119263 940 ntBASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp8Q9DB85 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rrp8Q9DB85 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.59■□□□□ 0.41
Rrp8Q9DB85 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rrp8Q9DB85 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.59■□□□□ 0.41
Rrp8Q9DB85 Gm10819-201ENSMUST00000099988 561 ntBASIC17.59■□□□□ 0.41
Rrp8Q9DB85 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rrp8Q9DB85 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rrp8Q9DB85 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.58■□□□□ 0.41
Rrp8Q9DB85 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rrp8Q9DB85 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rrp8Q9DB85 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms