Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2aQ9DB34 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Gm2399-201ENSMUST00000104944 225 ntBASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2aQ9DB34 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Chmp2aQ9DB34 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chmp2aQ9DB34 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.77■□□□□ 0.59
Chmp2aQ9DB34 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.77■□□□□ 0.59
Chmp2aQ9DB34 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Gm12527-201ENSMUST00000117967 564 ntBASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Gm2559-201ENSMUST00000201323 363 ntBASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Gm20049-201ENSMUST00000219950 730 ntBASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.76■□□□□ 0.59
Chmp2aQ9DB34 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Fst-202ENSMUST00000223640 2612 ntBASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Gm27275-201ENSMUST00000184318 272 ntBASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2aQ9DB34 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Gm10653-202ENSMUST00000139570 835 ntBASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Gm27011-201ENSMUST00000182352 972 ntBASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2aQ9DB34 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2aQ9DB34 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2aQ9DB34 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms