Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
U2af1Q9D883 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
U2af1Q9D883 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC23.66■■□□□ 1.38
U2af1Q9D883 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
U2af1Q9D883 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC23.65■■□□□ 1.38
U2af1Q9D883 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
U2af1Q9D883 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC23.65■■□□□ 1.38
U2af1Q9D883 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
U2af1Q9D883 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
U2af1Q9D883 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC23.65■■□□□ 1.38
U2af1Q9D883 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
U2af1Q9D883 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC23.65■■□□□ 1.38
U2af1Q9D883 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
U2af1Q9D883 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
U2af1Q9D883 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
U2af1Q9D883 Gm35558-201ENSMUST00000222675 2219 ntBASIC23.64■■□□□ 1.38
U2af1Q9D883 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
U2af1Q9D883 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
U2af1Q9D883 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
U2af1Q9D883 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
U2af1Q9D883 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
U2af1Q9D883 Gm42545-201ENSMUST00000202755 922 ntBASIC23.64■■□□□ 1.37
U2af1Q9D883 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.64■■□□□ 1.37
U2af1Q9D883 Gm18025-201ENSMUST00000221733 862 ntBASIC23.64■■□□□ 1.37
U2af1Q9D883 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.64■■□□□ 1.37
U2af1Q9D883 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
U2af1Q9D883 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC23.64■■□□□ 1.37
U2af1Q9D883 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
U2af1Q9D883 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
U2af1Q9D883 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
U2af1Q9D883 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC23.63■■□□□ 1.37
U2af1Q9D883 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
U2af1Q9D883 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
U2af1Q9D883 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
U2af1Q9D883 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
U2af1Q9D883 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
U2af1Q9D883 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
U2af1Q9D883 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
U2af1Q9D883 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
U2af1Q9D883 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC23.62■■□□□ 1.37
U2af1Q9D883 Mir2861-201ENSMUST00000175539 82 ntBASIC23.62■■□□□ 1.37
U2af1Q9D883 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.62■■□□□ 1.37
U2af1Q9D883 Gm10252-201ENSMUST00000209541 832 ntBASIC23.62■■□□□ 1.37
U2af1Q9D883 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
U2af1Q9D883 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
U2af1Q9D883 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
U2af1Q9D883 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
U2af1Q9D883 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
U2af1Q9D883 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
U2af1Q9D883 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
U2af1Q9D883 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
U2af1Q9D883 Mir6349-201ENSMUST00000184059 97 ntBASIC23.61■■□□□ 1.37
U2af1Q9D883 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.61■■□□□ 1.37
U2af1Q9D883 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
U2af1Q9D883 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
U2af1Q9D883 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
U2af1Q9D883 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
U2af1Q9D883 Gm10654-201ENSMUST00000098653 1633 ntBASIC23.61■■□□□ 1.37
U2af1Q9D883 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC23.61■■□□□ 1.37
U2af1Q9D883 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23.6■■□□□ 1.37
U2af1Q9D883 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
U2af1Q9D883 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC23.6■■□□□ 1.37
U2af1Q9D883 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC23.6■■□□□ 1.37
U2af1Q9D883 Gm43183-201ENSMUST00000200632 547 ntBASIC23.6■■□□□ 1.37
U2af1Q9D883 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC23.6■■□□□ 1.37
U2af1Q9D883 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
U2af1Q9D883 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
U2af1Q9D883 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
U2af1Q9D883 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
U2af1Q9D883 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
U2af1Q9D883 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
U2af1Q9D883 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
U2af1Q9D883 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
U2af1Q9D883 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.59■■□□□ 1.37
U2af1Q9D883 Arhgef33-211ENSMUST00000225658 473 ntBASIC23.59■■□□□ 1.37
U2af1Q9D883 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
U2af1Q9D883 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
U2af1Q9D883 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC23.58■■□□□ 1.37
U2af1Q9D883 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
U2af1Q9D883 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
U2af1Q9D883 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
U2af1Q9D883 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
U2af1Q9D883 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.36
U2af1Q9D883 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC23.58■■□□□ 1.36
U2af1Q9D883 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
U2af1Q9D883 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
U2af1Q9D883 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms