Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rpap3Q9D706 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rpap3Q9D706 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.84■□□□□ 0.77
Rpap3Q9D706 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.84■□□□□ 0.77
Rpap3Q9D706 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.84■□□□□ 0.77
Rpap3Q9D706 Odf3b-204ENSMUST00000227834 930 ntBASIC19.84■□□□□ 0.77
Rpap3Q9D706 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap3Q9D706 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpap3Q9D706 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rpap3Q9D706 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.83■□□□□ 0.77
Rpap3Q9D706 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rpap3Q9D706 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpap3Q9D706 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.83■□□□□ 0.77
Rpap3Q9D706 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.83■□□□□ 0.77
Rpap3Q9D706 Timm23-208ENSMUST00000226683 750 ntBASIC19.83■□□□□ 0.77
Rpap3Q9D706 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpap3Q9D706 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpap3Q9D706 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpap3Q9D706 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rpap3Q9D706 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap3Q9D706 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap3Q9D706 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.83■□□□□ 0.76
Rpap3Q9D706 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap3Q9D706 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap3Q9D706 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap3Q9D706 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpap3Q9D706 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Rpap3Q9D706 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpap3Q9D706 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap3Q9D706 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.81■□□□□ 0.76
Rpap3Q9D706 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rpap3Q9D706 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.81■□□□□ 0.76
Rpap3Q9D706 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpap3Q9D706 Golph3-205ENSMUST00000228671 2842 ntBASIC19.8■□□□□ 0.76
Rpap3Q9D706 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.8■□□□□ 0.76
Rpap3Q9D706 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpap3Q9D706 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rpap3Q9D706 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpap3Q9D706 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rpap3Q9D706 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpap3Q9D706 Gm13836-201ENSMUST00000121159 501 ntBASIC19.78■□□□□ 0.76
Rpap3Q9D706 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms