Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Ccdc7Q9D541 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Ccdc7Q9D541 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc7Q9D541 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc7Q9D541 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Gm7291-201ENSMUST00000199147 382 ntBASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Gm6365-201ENSMUST00000054711 744 ntBASIC21.06■□□□□ 0.96
Ccdc7Q9D541 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc7Q9D541 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc7Q9D541 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Gm18284-201ENSMUST00000172604 624 ntBASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Ccdc7Q9D541 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc7Q9D541 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.03■□□□□ 0.96
Ccdc7Q9D541 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc7Q9D541 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc7Q9D541 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc7Q9D541 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Gm7290-201ENSMUST00000104990 617 ntBASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Gm12918-201ENSMUST00000120234 636 ntBASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Gm15710-201ENSMUST00000121821 636 ntBASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Gm6211-202ENSMUST00000167849 925 ntBASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Gm38285-201ENSMUST00000192928 922 ntBASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Gm5075-201ENSMUST00000196916 622 ntBASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.02■□□□□ 0.96
Ccdc7Q9D541 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc7Q9D541 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc7Q9D541 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc7Q9D541 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc7Q9D541 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21■□□□□ 0.95
Ccdc7Q9D541 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21■□□□□ 0.95
Ccdc7Q9D541 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccdc7Q9D541 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc7Q9D541 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ccdc7Q9D541 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms