Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Upk1aQ9D132 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Upk1aQ9D132 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk1aQ9D132 Idnk-204ENSMUST00000226010 1898 ntBASIC17.1■□□□□ 0.33
Upk1aQ9D132 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.1■□□□□ 0.33
Upk1aQ9D132 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.1■□□□□ 0.33
Upk1aQ9D132 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.1■□□□□ 0.33
Upk1aQ9D132 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk1aQ9D132 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk1aQ9D132 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk1aQ9D132 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Upk1aQ9D132 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upk1aQ9D132 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Upk1aQ9D132 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.09■□□□□ 0.33
Upk1aQ9D132 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk1aQ9D132 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.08■□□□□ 0.33
Upk1aQ9D132 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk1aQ9D132 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk1aQ9D132 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk1aQ9D132 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Upk1aQ9D132 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.08■□□□□ 0.33
Upk1aQ9D132 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Upk1aQ9D132 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Upk1aQ9D132 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk1aQ9D132 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk1aQ9D132 Gm43060-201ENSMUST00000200621 289 ntBASIC17.08■□□□□ 0.32
Upk1aQ9D132 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.08■□□□□ 0.32
Upk1aQ9D132 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk1aQ9D132 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk1aQ9D132 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk1aQ9D132 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Upk1aQ9D132 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk1aQ9D132 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk1aQ9D132 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upk1aQ9D132 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.07■□□□□ 0.32
Upk1aQ9D132 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upk1aQ9D132 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1aQ9D132 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Upk1aQ9D132 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1aQ9D132 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.06■□□□□ 0.32
Upk1aQ9D132 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.06■□□□□ 0.32
Upk1aQ9D132 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.06■□□□□ 0.32
Upk1aQ9D132 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1aQ9D132 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.06■□□□□ 0.32
Upk1aQ9D132 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.06■□□□□ 0.32
Upk1aQ9D132 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1aQ9D132 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1aQ9D132 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1aQ9D132 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1aQ9D132 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1aQ9D132 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1aQ9D132 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1aQ9D132 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1aQ9D132 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1aQ9D132 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1aQ9D132 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.04■□□□□ 0.32
Upk1aQ9D132 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1aQ9D132 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms