Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf135Q9CWS1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rnf135Q9CWS1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rnf135Q9CWS1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rnf135Q9CWS1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf135Q9CWS1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.68■□□□□ 0.58
Rnf135Q9CWS1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf135Q9CWS1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rnf135Q9CWS1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
Rnf135Q9CWS1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms