Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc43Q9CR29 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.02■□□□□ 0.8
Ccdc43Q9CR29 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 Gm26571-201ENSMUST00000181399 666 ntBASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc43Q9CR29 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc43Q9CR29 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ccdc43Q9CR29 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc43Q9CR29 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc43Q9CR29 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc43Q9CR29 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms