Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb1Q9CQ70 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb1Q9CQ70 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 AV356131-201ENSMUST00000206201 750 ntBASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb1Q9CQ70 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Gm8969-201ENSMUST00000199694 526 ntBASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
H2afb1Q9CQ70 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb1Q9CQ70 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.7□□□□□ -0.06
H2afb1Q9CQ70 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H2afb1Q9CQ70 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms