Protein–RNA interactions for Protein: Q9CPU1

Ssxb1, MCG116417, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb1Q9CPU1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssxb1Q9CPU1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ssxb1Q9CPU1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ssxb1Q9CPU1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Ssxb1Q9CPU1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.64■□□□□ 0.41
Ssxb1Q9CPU1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Gm8969-201ENSMUST00000199694 526 ntBASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssxb1Q9CPU1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssxb1Q9CPU1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssxb1Q9CPU1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssxb1Q9CPU1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssxb1Q9CPU1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms