Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim11Q99PQ2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim11Q99PQ2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Trim11Q99PQ2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim11Q99PQ2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim11Q99PQ2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim11Q99PQ2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim11Q99PQ2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim11Q99PQ2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim11Q99PQ2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim11Q99PQ2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim11Q99PQ2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim11Q99PQ2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim11Q99PQ2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim11Q99PQ2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim11Q99PQ2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.48■□□□□ 0.87
Trim11Q99PQ2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Gm6211-202ENSMUST00000167849 925 ntBASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim11Q99PQ2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Gm7291-201ENSMUST00000199147 382 ntBASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim11Q99PQ2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim11Q99PQ2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim11Q99PQ2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms