Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf111Q99ML9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf111Q99ML9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf111Q99ML9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Nespas-201ENSMUST00000143738 1083 ntBASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf111Q99ML9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf111Q99ML9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Rnf111Q99ML9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf111Q99ML9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf111Q99ML9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms