Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Gm22325-201ENSMUST00000158904 308 ntBASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap3Q99LM2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Gm10493-201ENSMUST00000097270 612 ntBASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap3Q99LM2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdk5rap3Q99LM2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cdk5rap3Q99LM2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdk5rap3Q99LM2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Gm6420-201ENSMUST00000193885 723 ntBASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Cdk5rap3Q99LM2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Nespas-201ENSMUST00000143738 1083 ntBASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdk5rap3Q99LM2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap3Q99LM2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap3Q99LM2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap3Q99LM2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.6■□□□□ 0.57
Cdk5rap3Q99LM2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap3Q99LM2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cdk5rap3Q99LM2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap3Q99LM2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cdk5rap3Q99LM2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.6■□□□□ 0.57
Cdk5rap3Q99LM2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap3Q99LM2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap3Q99LM2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap3Q99LM2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap3Q99LM2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap3Q99LM2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap3Q99LM2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.59■□□□□ 0.57
Cdk5rap3Q99LM2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap3Q99LM2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms