Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cttnbp2nlQ99LJ0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm40848-201ENSMUST00000221998 324 ntBASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cttnbp2nlQ99LJ0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cttnbp2nlQ99LJ0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Cttnbp2nlQ99LJ0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cttnbp2nlQ99LJ0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.14■□□□□ 0.5
Cttnbp2nlQ99LJ0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cttnbp2nlQ99LJ0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cttnbp2nlQ99LJ0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cttnbp2nlQ99LJ0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cttnbp2nlQ99LJ0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 129.7 ms