Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd3Q99LE3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Lysmd3Q99LE3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lysmd3Q99LE3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Gm15375-201ENSMUST00000119510 849 ntBASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd3Q99LE3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd3Q99LE3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lysmd3Q99LE3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd3Q99LE3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.6■□□□□ 0.57
Lysmd3Q99LE3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd3Q99LE3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms