Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cstf1Q99LC2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cstf1Q99LC2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cstf1Q99LC2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.95■□□□□ 0.46
Cstf1Q99LC2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cstf1Q99LC2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cstf1Q99LC2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cstf1Q99LC2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cstf1Q99LC2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cstf1Q99LC2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Gm38285-201ENSMUST00000192928 922 ntBASIC17.94■□□□□ 0.46
Cstf1Q99LC2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cstf1Q99LC2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Gm27463-201ENSMUST00000183569 57 ntBASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cstf1Q99LC2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Mir5130-201ENSMUST00000175160 84 ntBASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cstf1Q99LC2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Mir6349-201ENSMUST00000184059 97 ntBASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Cstf1Q99LC2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cstf1Q99LC2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.9■□□□□ 0.46
Cstf1Q99LC2 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.9■□□□□ 0.46
Cstf1Q99LC2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cstf1Q99LC2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cstf1Q99LC2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cstf1Q99LC2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cstf1Q99LC2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cstf1Q99LC2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cstf1Q99LC2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cstf1Q99LC2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cstf1Q99LC2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Gm12085-201ENSMUST00000119263 940 ntBASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cstf1Q99LC2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms