Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prdm9Q96EQ9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prdm9Q96EQ9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Gm715-201ENSMUST00000117865 831 ntBASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.67■□□□□ 0.42
Prdm9Q96EQ9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prdm9Q96EQ9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Prdm9Q96EQ9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms