Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.69■□□□□ 0.9
Smc1bQ920F6 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.68■□□□□ 0.9
Smc1bQ920F6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.68■□□□□ 0.9
Smc1bQ920F6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc1bQ920F6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.67■□□□□ 0.9
Smc1bQ920F6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc1bQ920F6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.67■□□□□ 0.9
Smc1bQ920F6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc1bQ920F6 BC021767-201ENSMUST00000126387 1716 ntBASIC20.67■□□□□ 0.9
Smc1bQ920F6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smc1bQ920F6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.66■□□□□ 0.9
Smc1bQ920F6 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.66■□□□□ 0.9
Smc1bQ920F6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc1bQ920F6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc1bQ920F6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smc1bQ920F6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.64■□□□□ 0.9
Smc1bQ920F6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc1bQ920F6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc1bQ920F6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.64■□□□□ 0.9
Smc1bQ920F6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.64■□□□□ 0.9
Smc1bQ920F6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc1bQ920F6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smc1bQ920F6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc1bQ920F6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Smc1bQ920F6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc1bQ920F6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc1bQ920F6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc1bQ920F6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc1bQ920F6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc1bQ920F6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc1bQ920F6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.63■□□□□ 0.89
Smc1bQ920F6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc1bQ920F6 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.63■□□□□ 0.89
Smc1bQ920F6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc1bQ920F6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc1bQ920F6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.62■□□□□ 0.89
Smc1bQ920F6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc1bQ920F6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc1bQ920F6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Smc1bQ920F6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc1bQ920F6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Smc1bQ920F6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms