Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pcdha11Q91Y19 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Gm10138-203ENSMUST00000206952 366 ntBASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
Pcdha11Q91Y19 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.91■□□□□ 0.62
Pcdha11Q91Y19 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Gm15378-201ENSMUST00000121894 207 ntBASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha11Q91Y19 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdha11Q91Y19 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdha11Q91Y19 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdha11Q91Y19 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Gm10698-201ENSMUST00000182663 604 ntBASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha11Q91Y19 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdha11Q91Y19 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdha11Q91Y19 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha11Q91Y19 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Pcdha11Q91Y19 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha11Q91Y19 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha11Q91Y19 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha11Q91Y19 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha11Q91Y19 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdha11Q91Y19 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Gm15375-201ENSMUST00000119510 849 ntBASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdha11Q91Y19 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha11Q91Y19 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha11Q91Y19 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdha11Q91Y19 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha11Q91Y19 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdha11Q91Y19 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdha11Q91Y19 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdha11Q91Y19 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms